Principles of Inheritance and Variation

Study notes for Biology Updated September 17, 2026

Chapter overview

Principles of Inheritance and Variation notes – green pea pods, the plant Mendel used for his experiments
Photo: Monika Grabkowska on Unsplash

Principles of Inheritance and Variation carries some of the most reliable marks in NEET Biology, because its questions follow patterns you can practise. These notes cover Mendel's monohybrid and dihybrid crosses, the exceptions to his laws, linkage, sex determination, pedigree analysis and genetic disorders, with the problems worked step by step.

The shortcut that solves most cross problems

Treat each gene separately, find its probability, then multiply. For $Aa \times Aa$, the chance of $aa$ is $\tfrac{1}{4}$; for two independent genes, the chance of $aabb$ is $\tfrac{1}{4} \times \tfrac{1}{4} = \tfrac{1}{16}$. You rarely need to draw a 16-box Punnett square.

1. Terms you must be exact about

TermMeaning
Gene (factor)The unit of inheritance that controls a trait
AlleleOne of the alternative forms of a gene, such as $T$ and $t$
HomozygousBoth alleles the same: $TT$ or $tt$
HeterozygousTwo different alleles: $Tt$
Genotype / phenotypeThe genetic make-up / the observable trait
True-breeding lineOne that shows the same trait over several generations of self-pollination
Test crossCrossing an organism of unknown genotype with a homozygous recessive

2. Mendel and the garden pea

Gregor Mendel ran his hybridisation experiments on garden pea from 1856 to 1863. The pea worked well because it had clearly contrasting traits, true-breeding lines, and could be self- or cross-pollinated. Mendel also used large samples and statistics — new for biology at the time. He studied seven pairs of contrasting traits:

CharacterDominantRecessive
Stem heightTallDwarf
Flower colourVioletWhite
Flower positionAxialTerminal
Pod shapeInflatedConstricted
Pod colourGreenYellow
Seed shapeRoundWrinkled
Seed colourYellowGreen

Note the trap: green is dominant for pod colour but recessive for seed colour.

3. Monohybrid cross

A true-breeding tall plant ($TT$) is crossed with a dwarf plant ($tt$). Every F1 plant is $Tt$ and tall. When F1 plants self-pollinate, the F2 generation looks like this:

$T$$t$
$T$$TT$ — tall$Tt$ — tall
$t$$Tt$ — tall$tt$ — dwarf
  • Phenotypic ratio — tall : dwarf $= 3 : 1$
  • Genotypic ratio — $TT : Tt : tt = 1 : 2 : 1$
  • Law of dominance: in a heterozygote, one allele (dominant) expresses itself and the other (recessive) does not.
  • Law of segregation: the two alleles of a gene separate during gamete formation, so each gamete receives only one.
  • Test cross: $Tt \times tt$ gives tall : dwarf $= 1 : 1$, while $TT \times tt$ gives all tall. That is how a test cross reveals the unknown genotype.

4. When Mendel's ratios change

PatternWhat happensExampleF2 ratio
Incomplete dominanceThe heterozygote shows an intermediate phenotypeSnapdragon: red $RR$ × white $rr$ gives pink $Rr$$1 : 2 : 1$ for both phenotype and genotype
CodominanceBoth alleles are fully expressed togetherBlood group AB, with genotype $I^AI^B$
Multiple allelesA gene has more than two alleles in the population, though each person carries only twoABO blood groups: $I^A$, $I^B$, $i$
PleiotropyOne gene affects several traitsPhenylketonuria
Polygenic inheritanceSeveral genes add up to control one traitHuman skin colourA continuous range of phenotypes
GenotypeBlood group
$I^AI^A$ or $I^Ai$A
$I^BI^B$ or $I^Bi$B
$I^AI^B$AB (codominance)
$ii$O

Three alleles give six genotypes but only four phenotypes.

Worked example: blood groups

A father with blood group A (genotype $I^Ai$) and a mother with blood group B ($I^Bi$) have children. What blood groups are possible?

Father's gametes: $I^A$ or $i$. Mother's gametes: $I^B$ or $i$.

Children: $I^AI^B$ (AB), $I^Ai$ (A), $I^Bi$ (B), $ii$ (O) — each with probability $\tfrac{1}{4}$. All four blood groups are possible.

5. Dihybrid cross

Crossing a round yellow pea ($RRYY$) with a wrinkled green pea ($rryy$) gives F1 plants that are all $RrYy$, round and yellow. In F2:

$$\text{round yellow} : \text{round green} : \text{wrinkled yellow} : \text{wrinkled green} = 9 : 3 : 3 : 1$$

Law of independent assortment: when two pairs of traits are combined in a hybrid, the segregation of one pair is independent of the other.

Worked examples: probability shortcuts

1. In an $RrYy \times RrYy$ cross, what fraction of the offspring is round and green?
$P(\text{round}) = \tfrac{3}{4}$ and $P(\text{green}) = \tfrac{1}{4}$, so $\tfrac{3}{4} \times \tfrac{1}{4} = \tfrac{3}{16}$.

2. What does the dihybrid test cross $RrYy \times rryy$ give?
Four phenotypes in the ratio $1 : 1 : 1 : 1$.

3. For $AaBbCc \times AaBbCc$: each parent makes $2^3 = 8$ kinds of gametes, and the chance of an $aabbcc$ offspring is $\left(\tfrac{1}{4}\right)^3 = \tfrac{1}{64}$.

6. Chromosomal theory, linkage and recombination

  • Walter Sutton and Theodor Boveri proposed the chromosomal theory of inheritance: genes sit on chromosomes, and chromosomes pairing and separating at meiosis explains Mendel's laws.
  • Thomas Hunt Morgan worked with Drosophila and found that genes on the same chromosome tend to be inherited together. He called this linkage, and the new combinations produced by crossing over recombination.
  • The body-colour and eye-colour genes in Drosophila showed only 1.3% recombination, meaning they are tightly linked. The eye-colour and wing-size genes showed 37.2%, meaning they are loosely linked.
  • Alfred Sturtevant used recombination frequency to map the positions of genes on a chromosome. 1% recombination is taken as 1 map unit.

7. Sex determination

SystemFemaleMaleExample
XX–XOXXXO (one fewer chromosome)Grasshopper
XX–XYXXXY — male heterogameticHumans, Drosophila
ZW–ZZZW — female heterogameticZZBirds
HaplodiploidyDiploid, 32 chromosomes, from a fertilised eggHaploid, 16 chromosomes, from an unfertilised eggHoney bee

In humans the sperm decides the sex of the child: an X-bearing sperm gives a girl, a Y-bearing sperm gives a boy. The chance of either is 50% in every pregnancy.

8. Reading a pedigree

Squares are males, circles are females, shaded symbols are affected individuals, and a line joining a male and a female is a mating. Use these clues:

  • Two unaffected parents have an affected child: the trait is recessive.
  • The trait appears in every generation, and every affected child has an affected parent: it is probably dominant.
  • Mostly males are affected, and the trait passes to them through unaffected mothers: it is probably X-linked recessive.

9. Mendelian disorders

DisorderInheritanceKey fact
HaemophiliaX-linked recessiveA protein in the blood-clotting cascade is affected. Females are affected only if the mother is at least a carrier and the father is haemophilic. Queen Victoria's family is the classic pedigree.
Colour blindnessX-linked recessiveDefect in red or green cones. Affects about 8% of males and 0.4% of females.
Sickle-cell anaemiaAutosomal recessiveThe codon GAG changes to GUG, so glutamic acid is replaced by valine at the 6th position of the β-globin chain.
PhenylketonuriaAutosomal recessiveThe enzyme that converts phenylalanine to tyrosine is missing, so phenylalanine builds up. Also an example of pleiotropy.
ThalassaemiaAutosomal recessiveToo little globin is made — a quantitative defect. α-thalassaemia genes are on chromosome 16; β-thalassaemia on chromosome 11.
Myotonic dystrophyAutosomal dominantA dominant disorder: one copy of the allele is enough to cause it.
Worked example: colour blindness

A woman with normal vision whose father was colour blind marries a man with normal vision. What can their children inherit?

She must be a carrier, $X^CX^c$. He is $X^CY$.

$X^C$ (father)$Y$ (father)
$X^C$ (mother)$X^CX^C$ — normal daughter$X^CY$ — normal son
$X^c$ (mother)$X^CX^c$ — carrier daughter$X^cY$ — colour-blind son

No daughter is colour blind, but half the daughters are carriers. Half the sons are colour blind. Across all children, the chance of a colour-blind child is $\tfrac{1}{4}$.

10. Chromosomal disorders

DisorderChromosomesKey features
Down syndromeTrisomy 21 (47 chromosomes)First described by Langdon Down (1866). Short stature, small round head, furrowed tongue, partly open mouth, broad palm with a characteristic crease, delayed physical and mental development.
Klinefelter syndrome47, XXYMale with an extra X. Overall masculine development, but may have gynaecomastia (breast development) and is sterile.
Turner syndrome45, XOFemale missing one X. Sterile, with rudimentary ovaries and lack of other secondary sexual characters.
Mistakes that cost marks
  • Giving the genotypic ratio $1 : 2 : 1$ when the question asks for the phenotypic ratio $3 : 1$.
  • Mixing up incomplete dominance (a blend, as in pink snapdragons) with codominance (both expressed, as in blood group AB).
  • Doing a test cross with a heterozygote. The tester is always homozygous recessive.
  • Assuming the male is heterogametic in every species. In birds it is the female (ZW).
  • Saying haemophilia can never affect females. It is rare, not impossible.
  • Taking the male honey bee as diploid. Drones are haploid.
  • Calling sickle-cell anaemia X-linked. It is autosomal recessive.
60-second recap
  • Monohybrid F2: $3 : 1$ phenotype, $1 : 2 : 1$ genotype. Dihybrid F2: $9 : 3 : 3 : 1$.
  • Test cross ratios: $1 : 1$ monohybrid, $1 : 1 : 1 : 1$ dihybrid.
  • ABO: three alleles, six genotypes, four phenotypes; AB shows codominance.
  • Low recombination frequency means tight linkage; 1% recombination is 1 map unit.
  • Birds: female ZW. Honey bee: male haploid.
  • Haemophilia and colour blindness: X-linked recessive. Sickle-cell, PKU, thalassaemia: autosomal recessive.
  • Down: trisomy 21. Klinefelter: XXY. Turner: XO.

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